BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H10SP1|AL428986
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1687 1456 0.0
>3x_Contig1687
Length = 12800
Score = 1456 bits (722), Expect = 0.0
Identities = 764/789 (96%), Gaps = 3/789 (0%)
Strand = Plus / Plus
Query: 1 atkagaacttcaatctgttgaacaaaagtcaaatttgttccacatttggtgatatgacga 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3227 atgagaacttcaatctgttgaacaaaagtcaaatttgttccacatttggtgatatgacga 3286
Query: 61 attgcagttgagawatatctatttkgaggcaacccctggtattttccagtggtcttgtgt 120
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3287 attgcagttgagaaatatctatttggaggcaacccctggtattttccagtggtcttgtgt 3346
Query: 121 aaatgggctgawatgctgaaaactaaccacattctaccacaggagaaatggaattcattg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3347 aaatgggctgaaatgctgaaaactaaccacattctaccacaggagaaatggaattcattg 3406
Query: 181 attgawtatgagtgaacattattattwwtwtwwtcwttgtggaaagtgtaaatctcttgt 240
||||| |||||||||||||||||||| | | || ||||||||||||||||||||||||
Sbjct: 3407 attgaatatgagtgaacattattattaatataatcattgtggaaagtgtaaatctcttgt 3466
Query: 241 tcatctagaagtggatatttgawttgaagtcttgtaaagtaggtgtccaaaaacgctcta 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3467 tcatctagaagtggatatttgaattgaagtcttgtaaagtaggtgtccaaaaacgctcta 3526
Query: 301 ctcaattgttcatcaaattcgaaagctggatcatatgacaagaactctttcaagttgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3527 ctcaattgttcatcaaattcgaaagctggatcatatgacaagaactctttcaagttgtat 3586
Query: 361 tttgcgaaawtkcaacgtgaatwatcgattgattcgagagaatcagatgctaaggattcc 420
||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3587 tttgcgaaaatgcaacgtgaataatcgattgattcgagagaatcagatgctaaggattcc 3646
Query: 421 aatgctcgttcatgagaatkaggaggcttaatcatgccagahcgttgtggttgattttka 480
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |
Sbjct: 3647 aatgctcgttcatgagaatgaggaggcttaatcatgccagaacgttgtggttgattttga 3706
Query: 481 gactgttgatgtagaggtaawttcttagttttcggaggcggaggtagtataggtgaccta 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3707 gactgttgatgtagaggtaaaaacttagttttcggaggcggaggtagtataggtgaccta 3766
Query: 541 atcctcgttatctgttgatcctgagctacccctgctgccccattcggctgctgtgatagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3767 atcctcgttatctgttgatcctgagctacccctgctgccccattcggctgctgtgatagc 3826
Query: 601 ga--caggcaagtgtattagawggtgcagtttgttgtgccgccgtgggaggaagcacagt 658
|| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3827 gaagca-gcaagtgtattagaaggtgcagtttgttgtgccgccgtgggaggaagcacagt 3885
Query: 659 tgttatatcatcctgatcaggttctccgttgtccaaaagatgagcaaccttcttgtattt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3886 tgttatatcatcctgatcaggttctccgttgtccaaaagatgagcaaccttcttgtattt 3945
Query: 719 gctgagtttctctttatacgagttcgtatctggtttcatgtcaactaatttttctagata 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3946 gctgagtttctctttatacgagttcgtatctggtttcatgtcaactaatttttctagata 4005
Query: 779 tttcaactt 787
|||||||||
Sbjct: 4006 tttcaactt 4014
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4759
Number of Sequences: 1807
Number of extensions: 4759
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)